HPC WebAtom ( vs. 1)

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<<O>> Difference Topic WebAtom (1 - 2006-01-24 - TWikiContributor)

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> >	TWiki's HPC web The HPC web of TWiki. TWiki is a Web-Based Collaboration Platform for the Enterprise. https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC Copyright 2021 by contributing authors 2021-11-18T08:09:21Z WebHome https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC/WebHome 2021-11-18T08:09:21Z Welcome to the High Performance Computing (HPC) Facility wiki The High performance Computing (HPC) facility is setup to provide high performance computing power to... (last changed by ReneJanssen) ReneJanssen WebStatistics https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC/WebStatistics 2021-10-26T22:00:11Z Statistics for HPC Web Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors for topic save and... (last changed by TWikiAdminGroup) TWikiAdminGroup ContactDetails https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC/ContactDetails 2021-07-06T09:06:33Z ContactDetails Initial contact Initial intakes for new research groups and general information about the HPC facility are handled by Jeroen de Ridder. Please contact... (last changed by MartinMarinus) MartinMarinus SshCommandLine https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC/SshCommandLine 2021-04-09T08:12:00Z SSH configuration for Mac and Linux # goto your homedirectory cd # create a .ssh directory mkdir .ssh # goto .ssh directory cd ~/.ssh # create a ssh keypair ssh keygen... (last changed by ReneJanssen) ReneJanssen SlurmLimits https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC/SlurmLimits 2020-05-26T09:54:21Z Resource Limits in Slurm Very short summary The resources that we put limits on are: CPU, memory, GPU. And runtime, sort of. Whom do we limit this to? Not to you... (last changed by MartinMarinus) MartinMarinus HPCInTimesOfCovid19 https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC/HPCInTimesOfCovid19 2020-03-17T14:52:08Z HPC In Times Of Covid 19 (Un)limited Service Like most of you, we`re working from home at the moment. We try to provide the same service as always, so feel free... (last changed by MartinMarinus) MartinMarinus CromWellService https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC/CromWellService 2019-05-13T13:08:44Z Cromwell workflow management system Cromwell is a workflow management system geared towards scientific workflows. More information can be found online. It can function... (last changed by ReneJanssen) ReneJanssen MyTest https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC/MyTest 2019-05-13T09:47:23Z Title Article text. Comments (last changed by ReneJanssen) ReneJanssen ConditionsAndSupport https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC/ConditionsAndSupport 2018-05-22T07:39:51Z Conditions and Support Conditions In order to be able to use the HPC facility, you need to be affiliated with University Medical Center Utrecht, Utrecht University... (last changed by MartinMarinus) MartinMarinus ParticipatingGroups https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC/ParticipatingGroups 2017-12-08T11:19:26Z ParticipatingGroups University Medical Center Utrecht Division Biomedical Genetics Edwin Cuppen, Medical Genetics David Egan, Cellbiology Wigard Kloosterman... (last changed by PatrickKemmeren) PatrickKemmeren PuttyTerm https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC/PuttyTerm 2017-08-25T11:11:39Z change configuration Putty ssh client Load the current configuration for the gateway Change the configuration and save (last changed by ReneJanssen) ReneJanssen MakingSoftwareAvailableUsingLMOD https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC/MakingSoftwareAvailableUsingLMOD 2017-03-27T11:35:50Z Howto create your own/group software modules Introduction Often a program requires particular environment variables in order to run. LMOD environment modules provide... (last changed by ReneJanssen) ReneJanssen MobaXterm https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC/MobaXterm 2017-03-23T15:36:38Z MobaXterm change configuration edit configuration and change hostname (last changed by ReneJanssen) ReneJanssen Irods https://wiki.bioinformatics.umcutrecht.nl/bin/view/HPC/Irods 2017-03-01T15:00:56Z Irods Information The irods(https://irods.org/) commandline client software is installed in the hpct01 and hpct02 servers of the HPC. On these transfer servers you... (last changed by ReneJanssen) ReneJanssen <-- Set SKIN = rssatom -->

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