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Welcome to the High-Performance Computing (HPC) wiki

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Welcome to the High-Performance Computing (HPC) Facility wiki

 
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HPCflyer rasterized large.png
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HPC Flyer.png
 
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The High-performance Computing (HPC) cluster is part of workpackage 5 (infrastructure) of the Research ICT program of the UMC Utrecht and aims to provide high-performance computing power to researchers within the UMC Utrecht.

The first part of the wiki introduces the HPC cluster to those of you who may be interested to join. Take your time and have a look around.

The second part of the wiki contains useful practical information for users of the HPC cluster.

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The High-performance Computing (HPC) facility is setup to provide high-performance computing power to all life science researchers at Utrecht Science Park. Coordinated by the Utrecht Bioinformatics Center and subsidized by Utrecht University and University Medical Center, it currently provides computational power to over twenty different research groups located within Utrecht University, UMC Utrecht and the Hubrecht Institute.
  (for a high-resolution version of the HPC flyer, click on the thumbnail on the left)

General information

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The HPC cluster currently consists of 61 compute nodes (770 cores, 8TB working memory) and 220/490TB of HPC storage. Funded and used by UMC (6 divisions) and various groups at Utrecht University and the Hubrecht Laboratory), totalling 19 research groups.
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The HPC facility consists of 1200 cores, 10TB working memory and 490TB of High-Performance storage. The HPC facility runs on CentOS Linux and provides a batch-wise queueing system with a few head nodes and many compute nodes for submitting and running many computational tasks in parallel.
 
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A dedicated Linux administrator is funded by the research ICT program. In addition, the program subsidizes the HPC storage capacity.

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Dedicated administrators maintain and develop the HPC infrastructure and provide support to end users. These positions are funded by UMC Utrecht and Utrecht University (ITS).
  Participating groups. Currently, twenty-two research groups are actively using the HPC cluster.

HPC user council. To steer future directions of the HPC infrastructure together with the participating research groups, a HPC user council has been setup. We aim to meet four times a year to discuss the usage of the HPC cluster as well as new developments.

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