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ContactDetails Initial contact Initial intakes for new research groups and general information about the HPC facility are handled by Jeroen de Ridder. Please contact...
Slurm Starting in May 2019, we`re testing our new Slurm setup. Slurm is similar to GridEngine: it manages a cluster, distributing user jobs in (hopefully) a fair and...
Cromwell workflow management system Cromwell is a workflow management system geared towards scientific workflows. More information can be found online. It can function...
Title Article text. Comments
SoftwareInstallation Can I install my own software? The answer is: yes, (of course) you can. There is a group specific directory that is made available for this purpose...
Conditions and Support Conditions In order to be able to use the HPC facility, you need to be affiliated with University Medical Center Utrecht, Utrecht University...
ParticipatingGroups University Medical Center Utrecht Division Biomedical Genetics Edwin Cuppen, Medical Genetics David Egan, Cellbiology Wigard Kloosterman...
New Gateway on hpcgw.op.umcutrecht.nl We installed a new gateway server in the HPC named hpcgw.op.umcutrecht.nl. The old server gw.op.umcutrecht.nl will soon be disabled...
change configuration Putty ssh client Load the current configuration for the gateway Change the configuration and save
Welcome to the High Performance Computing (HPC) Facility wiki The High performance Computing (HPC) facility is setup to provide high performance computing power to...
Howto create your own/group software modules Introduction Often a program requires particular environment variables in order to run. LMOD environment modules provide...
MobaXterm change configuration edit configuration and change hostname
Irods Information The irods(https://irods.org/) commandline client software is installed in the hpct01 and hpct02 servers of the HPC. On these transfer servers you...
HPCUserCouncil To steer future directions for the high performance computing (HPC) research infrastructure, a HPC user council has been setup. This council will advise...
Test cluster queue setup There are a few changes in the queuing setup: On the `old` cluster, there were five queues: veryshort, short, medium, long, verylong...
HPC Web Preferences The following settings are web preferences of the HPC web. These preferences overwrite the site level preferences in . and...
HPC Test Cluster You can login on the submit host hpcs03.op.umcutrecht.nl. This host is available from outside. If you access the cluster from outside, use hpcs...
How to install a specific version of R R is installed by default, on the submit hosts and on the nodes, so usually it is unnecessary (and even slightly undesirable...
We are happy to announce that the HPC news blog is now online!
This is a subscription service to be automatically notified by e mail when topics change in this 1 web. This is a convenient service, so you do not have to come...
Top Menu of HPC Web This topic defines the menu structure of the HPC web, used by the TopMenuSkin. 1 Web` Create New Topic...
1 Web Create New Topic Index Search Changes Notifications RSS Feed Statistics Preferences
TWiki`s HPC web The 1 web of TWiki. TWiki is a Web Based Collaboration Platform for the Enterprise.
/HPC The 1 web of TWiki. TWiki is a Web Based Collaboration Platform for the Enterprise.

 

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Topic revision: r1 - 2006-11-15 - TWikiContributor
 
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